ITKCurvatureFlowImage
=====================
Group (Subgroup)¶
ITKImageProcessing (ITKImageProcessing)
Description¶
Denoise an image using curvature driven flow.
CurvatureFlowImageFilter implements a curvature driven image denoising algorithm. Iso-brightness contours in the grayscale input image are viewed as a level set. The level set is then evolved using a curvature-based speed function:
\f[ I_t = \kappa |\nabla I| \f] where \f$ \kappa \f$ is the curvature.
The advantage of this approach is that sharp boundaries are preserved with smoothing occurring only within a region. However, it should be noted that continuous application of this scheme will result in the eventual removal of all information as each contour shrinks to zero and disappear.
Note that unlike level set segmentation algorithms, the image to be denoised is already the level set and can be set directly as the input using the SetInput() method.
This filter has two parameters: the number of update iterations to be performed and the timestep between each update.
The timestep should be "small enough" to ensure numerical stability. Stability is guarantee when the timestep meets the CFL (Courant-Friedrichs-Levy) condition. Broadly speaking, this condition ensures that each contour does not move more than one grid position at each timestep. In the literature, the timestep is typically user specified and have to manually tuned to the application.
This filter make use of the multi-threaded finite difference solver hierarchy. Updates are computed using a CurvatureFlowFunction object. A zero flux Neumann boundary condition when computing derivatives near the data boundary.
This filter may be streamed. To support streaming this filter produces a padded output which takes into account edge effects. The size of the padding is m_NumberOfIterations on each edge. Users of this filter should only make use of the center valid central region.
\warning This filter assumes that the input and output types have the same dimensions. This filter also requires that the output image pixels are of a floating point type. This filter works for any dimensional images.
Reference: "Level Set Methods and Fast Marching Methods", J.A. Sethian, Cambridge Press, Chapter 16, Second edition, 1999.
\see DenseFiniteDifferenceImageFilter
\see CurvatureFlowFunction
\see MinMaxCurvatureFlowImageFilter
\see BinaryMinMaxCurvatureFlowImageFilter
Parameters¶
| Name | Type | Description |
|---|---|---|
| TimeStep | double | Set the timestep parameter. |
| NumberOfIterations | double | N/A |
Required Geometry¶
Image
Required Objects¶
| Kind | Default Name | Type | Component Dimensions | Description |
|---|---|---|---|---|
| Cell Attribute Array | None | N/A | (1) | Array containing input image |
Created Objects¶
| Kind | Default Name | Type | Component Dimensions | Description |
|---|---|---|---|---|
| Cell Attribute Array | None | typename itk::NumericTraits |
(1) | Array containing filtered image |
References¶
[1] T.S. Yoo, M. J. Ackerman, W. E. Lorensen, W. Schroeder, V. Chalana, S. Aylward, D. Metaxas, R. Whitaker. Engineering and Algorithm Design for an Image Processing API: A Technical Report on ITK - The Insight Toolkit. In Proc. of Medicine Meets Virtual Reality, J. Westwood, ed., IOS Press Amsterdam pp 586-592 (2002). [2] H. Johnson, M. McCormick, L. Ibanez. The ITK Software Guide: Design and Functionality. Fourth Edition. Published by Kitware Inc. 2015 ISBN: 9781-930934-28-3 [3] H. Johnson, M. McCormick, L. Ibanez. The ITK Software Guide: Introduction and Development Guidelines. Fourth Edition. Published by Kitware Inc. 2015 ISBN: 9781-930934-27-6
Example Pipelines¶
License & Copyright¶
Please see the description file distributed with this plugin.
DREAM3D Mailing Lists¶
If you need more help with a filter, please consider asking your question on the DREAM3D Users mailing list: https://groups.google.com/forum/?hl=en#!forum/dream3d-users