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Import Registered Image Montage

Group (Subgroup)

ITKImageProcessing (Input)

Description

Imports multiple images for the purpose of montage assembly. These images must be 8 bit greyscale, and have the same X pixel dimensions and the same Y pixel dimensions. Each image is stored in it's own attribute array. This filter allows for the import of a registration file that has the registered XY coordinates for each image.

Utilizes the itkReadImage filter.

Example Registration File

# Define the number of dimensions we are working on
dim = 2

# Define the image coordinates
slice_11.tif; ; (0.0, 0.0)
slice_12.tif; ; (471.2965233276666, -0.522608066434236)
slice_13.tif; ; (944.5992124792093, -0.7247005913413109)
slice_14.tif; ; (1419.6556996952306, -0.9362629861595396)
slice_15.tif; ; (1894.5906379078629, -1.1529111881475664)
slice_16.tif; ; (2369.039471380481, -1.9017522091702983)
slice_17.tif; ; (2843.7532978452855, -2.5246588293146055)

Parameters

Name Type
Input File List VectorFileListInfo type
Registration File Path String
Origin float x 3
Resolution float x 3
Data Container Name String
Cell Attribute Matrix Name String
Data Array Name String

Required DataContainers

NONE

Required Objects

NONE

Created Objects

Kind Default Name Type Component Dimensions Description
Data Container Data Container Name N/A N/A
ImageGeometry N/A N/A
Cell AttributeMatrix N/A N/A
Image Data N/A N/A

Authors:

Contact Info dream3d@bluequartz.net

Version 1.0.0

License See the License.txt file that came with DREAM3D.

Example Pipelines

Please see the description file distributed with this plugin.

DREAM3D Mailing Lists

If you need more help with a filter, please consider asking your question on the DREAM3D Users mailing list: https://groups.google.com/forum/?hl=en#!forum/dream3d-users